Details for gene set V$VDR

Table: GSEA Results Summary

Dataset	RNR_GSEA_DESEQ2_FC
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_neg
GeneSet	V$VDR_Q3
Enrichment Score (ES)	-0.10546529
Normalized Enrichment Score (NES)	-1.8202019
Nominal p-value	0.0139442235
FDR q-value	0.17876023
FWER p-Value	0.974

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HRK	388	1.032	-0.0163	No
2	INHA	455	0.962	-0.0151	No
3	NR4A3	518	0.871	-0.0137	No
4	STC1	663	0.713	-0.0168	No
5	PCDH7	965	0.540	-0.0284	No
6	FSCN3	1087	0.488	-0.0302	No
7	HOXB8	1101	0.482	-0.0261	No
8	IL11	1119	0.471	-0.0223	No
9	HOXC5	1220	0.435	-0.0229	No
10	PLXDC2	1255	0.422	-0.0200	No
11	GREM1	1526	0.346	-0.0299	No
12	SLITRK5	1872	0.281	-0.0439	No
13	ATP1A2	2139	0.246	-0.0536	No
14	STAG2	2326	0.226	-0.0589	No
15	SOX15	2492	0.210	-0.0631	No
16	SATB1	3111	0.166	-0.0919	No
17	MMP14	3133	0.164	-0.0883	No
18	RBM26	3451	0.148	-0.1007	Yes
19	TRPS1	3468	0.147	-0.0968	Yes
20	SMARCA5	3476	0.147	-0.0924	Yes
21	XPO1	3558	0.142	-0.0921	Yes
22	ARID1A	3710	0.135	-0.0955	Yes
23	DHH	3799	0.131	-0.0955	Yes
24	POGK	3842	0.129	-0.0930	Yes
25	GSK3B	3855	0.128	-0.0889	Yes
26	GTF2A1	3930	0.125	-0.0882	Yes
27	RBBP6	3968	0.124	-0.0854	Yes
28	R3HDM2	4080	0.119	-0.0867	Yes
29	RARB	4111	0.118	-0.0836	Yes
30	C11orf30	4153	0.116	-0.0810	Yes
31	SOX10	4169	0.116	-0.0771	Yes
32	XPO7	4179	0.115	-0.0728	Yes
33	POU2F1	4281	0.112	-0.0735	Yes
34	MSI1	4422	0.107	-0.0764	Yes
35	GPR173	4472	0.106	-0.0743	Yes
36	POGZ	4496	0.105	-0.0707	Yes
37	FGFR2	4536	0.103	-0.0681	Yes
38	PAN2	4586	0.102	-0.0660	Yes
39	ARHGAP8	4609	0.101	-0.0624	Yes
40	LCOR	4683	0.098	-0.0616	Yes
41	TMEM30A	4694	0.098	-0.0574	Yes
42	VEGFA	4755	0.096	-0.0559	Yes
43	SIN3A	5010	0.089	-0.0649	Yes
44	RFX5	5104	0.086	-0.0652	Yes
45	CHD2	5153	0.085	-0.0631	Yes
46	PRRT2	5222	0.082	-0.0620	Yes
47	NTRK1	5272	0.081	-0.0599	Yes
48	PTCH1	5569	0.073	-0.0712	Yes
49	NUFIP2	5594	0.073	-0.0677	Yes
50	DUOX2	5620	0.072	-0.0643	Yes
51	VEZF1	5794	0.067	-0.0690	Yes
52	BMF	5795	0.067	-0.0642	Yes
53	GPR4	5797	0.067	-0.0595	Yes
54	CHMP2B	5980	0.062	-0.0646	Yes
55	NLGN3	6022	0.062	-0.0621	Yes
56	NLK	6102	0.060	-0.0616	Yes
57	PRKAG1	6144	0.059	-0.0591	Yes
58	PRKCI	6173	0.058	-0.0558	Yes
59	EIF4G2	6188	0.058	-0.0518	Yes
60	TPT1	6327	0.055	-0.0545	Yes
61	HES7	6557	0.049	-0.0622	Yes
62	SLC2A4	6598	0.048	-0.0596	Yes
63	YWHAG	6629	0.048	-0.0565	Yes
64	NCOA6	6772	0.044	-0.0594	Yes
65	HNRNPUL1	6786	0.044	-0.0554	Yes
66	GRK5	6905	0.042	-0.0570	Yes
67	TSC22D3	6920	0.041	-0.0530	Yes
68	PATL1	6925	0.041	-0.0485	Yes
69	TMEM39A	6973	0.040	-0.0463	Yes
70	CTCF	7121	0.037	-0.0495	Yes
71	AGAP2	7257	0.034	-0.0521	Yes
72	PRKCH	7301	0.033	-0.0496	Yes
73	TGFB1	7321	0.033	-0.0459	Yes
74	BAHD1	7338	0.032	-0.0420	Yes
75	ASXL1	7413	0.031	-0.0413	Yes
76	DCHS1	7414	0.031	-0.0365	Yes
77	PHF12	7418	0.031	-0.0319	Yes
78	PICALM	7440	0.030	-0.0283	Yes
79	C1orf213	7529	0.028	-0.0283	Yes
80	MEIS2	7582	0.027	-0.0264	Yes
81	EIF4E	7678	0.025	-0.0267	Yes
82	AKT2	7783	0.023	-0.0276	Yes
83	MORF4L1	7877	0.022	-0.0279	Yes
84	ARHGEF2	7997	0.019	-0.0296	Yes
85	ENSA	8061	0.018	-0.0283	Yes
86	NR2F1	8147	0.016	-0.0281	Yes
87	PNKD	8148	0.016	-0.0234	Yes
88	TIMP3	8194	0.015	-0.0210	Yes
89	AAMP	8287	0.013	-0.0213	Yes
90	PCBP2	8395	0.011	-0.0223	Yes
91	KAT5	8466	0.010	-0.0214	Yes
92	MECOM	8474	0.010	-0.0170	Yes
93	SEC63	8487	0.009	-0.0129	Yes
94	PBX1	8512	0.009	-0.0094	Yes
95	FOXJ2	8536	0.008	-0.0059	Yes
96	ZBTB7A	8914	0.001	-0.0216	Yes
97	SRF	8989	-0.001	-0.0209	Yes
98	CALM1	9305	-0.007	-0.0332	Yes
99	PROX1	9320	-0.007	-0.0292	Yes
100	CCT7	9402	-0.009	-0.0288	Yes
101	HIF3A	9417	-0.009	-0.0248	Yes
102	NCAM1	9479	-0.010	-0.0234	Yes
103	FGF9	9685	-0.015	-0.0297	Yes
104	FKBP2	9701	-0.015	-0.0258	Yes
105	ZNF362	9822	-0.017	-0.0276	Yes
106	RARG	9873	-0.018	-0.0255	Yes
107	C19orf66	9887	-0.019	-0.0214	Yes
108	BCAM	9889	-0.019	-0.0167	Yes
109	HOXB7	10002	-0.020	-0.0181	Yes
110	TXNDC12	10066	-0.022	-0.0167	Yes
111	SHOX2	10098	-0.022	-0.0136	Yes
112	RAB6B	10182	-0.024	-0.0134	Yes
113	PTK7	10188	-0.024	-0.0089	Yes
114	NDUFA6	10244	-0.025	-0.0071	Yes
115	POLG	10274	-0.025	-0.0039	Yes
116	FBXO36	10300	-0.026	-0.0005	Yes
117	FLI1	10433	-0.028	-0.0029	Yes
118	TCF15	10450	-0.029	0.0010	Yes
119	DHX30	10468	-0.029	0.0048	Yes
120	PLXNB3	10521	-0.030	0.0067	Yes
121	PLCB3	10761	-0.035	-0.0015	Yes
122	ZBTB9	10781	-0.036	0.0023	Yes
123	LMO4	10976	-0.041	-0.0035	Yes
124	TLE3	11070	-0.043	-0.0038	Yes
125	TGFB3	11101	-0.044	-0.0007	Yes
126	AP1B1	11176	-0.046	0.0001	Yes
127	CXXC4	11216	-0.047	0.0027	Yes
128	ERRFI1	11232	-0.047	0.0067	Yes
129	MED26	11457	-0.052	-0.0007	Yes
130	PTMS	11481	-0.053	0.0028	Yes
131	JUND	11515	-0.054	0.0058	Yes
132	ATF7	11603	-0.055	0.0058	Yes
133	CYP24A1	11692	-0.058	0.0058	Yes
134	EIF5A	11739	-0.059	0.0081	Yes
135	MAZ	12027	-0.066	-0.0028	Yes
136	NUMBL	12186	-0.070	-0.0066	Yes
137	PRIMA1	12270	-0.071	-0.0063	Yes
138	FBRS	12346	-0.073	-0.0056	Yes
139	SLC26A10	12429	-0.075	-0.0053	Yes
140	FBXL19	12516	-0.078	-0.0052	Yes
141	PRADC1	12593	-0.080	-0.0046	Yes
142	GGA1	12628	-0.081	-0.0017	Yes
143	PPIE	12947	-0.090	-0.0142	Yes
144	EGLN2	12976	-0.091	-0.0109	Yes
145	THRA	13113	-0.095	-0.0136	Yes
146	RRBP1	13149	-0.097	-0.0107	Yes
147	CXCL14	13160	-0.097	-0.0065	Yes
148	RCL1	13183	-0.098	-0.0029	Yes
149	FURIN	13191	-0.098	0.0015	Yes
150	TBX2	13304	-0.102	0.0002	Yes
151	NTRK3	13453	-0.106	-0.0031	Yes
152	EFNB3	13526	-0.109	-0.0023	Yes
153	TRERF1	13595	-0.111	-0.0012	Yes
154	FAM57B	13654	-0.113	0.0004	Yes
155	CERS1	13680	-0.115	0.0038	Yes
156	ZNF436	13756	-0.118	0.0045	Yes
157	DACT3	13797	-0.119	0.0071	Yes
158	SSBP3	13821	-0.120	0.0106	Yes
159	GRM3	14032	-0.130	0.0040	Yes
160	NRGN	14094	-0.133	0.0054	Yes
161	ATXN7L2	14195	-0.138	0.0048	Yes
162	ZNF513	14393	-0.149	-0.0012	Yes
163	JAKMIP3	14438	-0.151	0.0012	Yes
164	BHLHE40	14508	-0.154	0.0022	Yes
165	ZNF688	14510	-0.154	0.0069	Yes
166	EBF1	14535	-0.155	0.0104	Yes
167	LRP1	14566	-0.157	0.0135	Yes
168	ARHGEF15	14773	-0.169	0.0071	Yes
169	KCNB1	14841	-0.174	0.0082	Yes
170	PRX	14875	-0.176	0.0112	Yes
171	KCND1	15010	-0.186	0.0087	Yes
172	WNT11	15092	-0.193	0.0090	Yes
173	LPHN1	15108	-0.194	0.0130	Yes
174	PTPN22	15162	-0.198	0.0149	Yes
175	ADRA2C	15245	-0.204	0.0152	Yes
176	CHRM1	15266	-0.206	0.0189	Yes
177	PPM1J	15277	-0.207	0.0231	Yes
178	RALGPS2	15346	-0.213	0.0242	Yes
179	ORAI1	15429	-0.221	0.0245	Yes
180	HOXA2	15483	-0.226	0.0264	Yes
181	PAX8	15487	-0.226	0.0310	Yes
182	CLDN15	15595	-0.237	0.0299	Yes
183	TSEN54	15679	-0.246	0.0302	Yes
184	CASKIN2	15766	-0.259	0.0303	Yes
185	ADRB1	15883	-0.273	0.0287	Yes
186	HOXA3	16054	-0.293	0.0243	Yes
187	SH3KBP1	16070	-0.295	0.0282	Yes
188	LAG3	16099	-0.300	0.0314	Yes
189	POU4F3	16119	-0.303	0.0352	Yes
190	BHLHE41	16307	-0.336	0.0298	Yes
191	FOXB1	16435	-0.361	0.0276	Yes
192	NEUROD2	16565	-0.392	0.0254	Yes
193	BCL11B	16598	-0.399	0.0284	Yes
194	ZNF385A	16648	-0.410	0.0305	Yes
195	NHLH1	16767	-0.444	0.0289	Yes
196	DUOXA2	16806	-0.454	0.0316	Yes
197	KLK13	17230	-0.592	0.0134	Yes
198	GPR97	17264	-0.609	0.0164	Yes
199	GRID2	17382	-0.669	0.0148	Yes
200	DLX3	17502	-0.735	0.0131	Yes
201	HAS1	17545	-0.764	0.0156	Yes
202	LIF	17548	-0.765	0.0202	Yes
203	SLC12A5	17569	-0.778	0.0239	Yes
204	FOS	17601	-0.807	0.0270	Yes
205	LMO1	17604	-0.808	0.0316	Yes
206	HOXD9	17871	-1.011	0.0219	Yes
207	KCNIP2	17922	-1.058	0.0240	Yes
208	LIN28A	17979	-1.108	0.0257	Yes
209	TBR1	18133	-1.301	0.0222	Yes
210	CD5L	18358	-1.796	0.0148	Yes